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  <front>
    <article-meta>
      <title-group>
        <article-title>Analysis of Pik3ca Gene Mutation along with Screening of Estrogen, Progesterone and Ki-67 Expression in Breast Cancer Cases</article-title>
      </title-group>
      <abstract>
        <p id="_paragraph-1">Analysis of Breast cancer exercised and contributed to the screening of the level of estrogen, progesterone and Ki-67 expression with prevalence rate of HER2/neu gene of mainly female population affected by breast cancer in Guwahati and along with detection of PIK3CA mutation in HER2/neu positive cases of other parts of the countries. A preliminary study conducted to analyze the prevalence, prognosis and treatment of breast cancer cases. In this study, we investigate the prevalence and expression patterns of estrogen receptor (ER), progesterone receptor (PgR), Ki-67, and HER2/neu gene, and identifies PIK3CA mutations in breast cancer patients from Guwahati, Northeast India, and other regions. A novel aspect of this study is the comparison of HER2/neu prevalence between Assam and other regions. Thus, the results indicated a lower HER2/neu positivity rate in Assam, with most affected individuals being housewives, that suggests unique regional risk factors. PIK3CA exon 20 mutations were identified in HER2- positive cases, potentially guiding targeted therapy.</p>
      </abstract>
    </article-meta>
  </front>
  <body id="body">
    <sec id="heading-fb3697cf81732da9afa55c6852d2effe">
      <title>Introduction</title>
      <sec id="heading-d5e23f9fd6d1a3684f78cf5f6aed62f8">
        <title>
          <italic id="italic-1">Breast Cancer: A Global Health Challenge<italic id="italic-2"/></italic>
        </title>
        <p id="paragraph-2">Breast cancer (BC) has emerged as a leading cause of morbidity and mortality among women worldwide. It ranks as the second most frequently diagnosed cancer globally, highlighting its significant impact on public health [1]. Despite advancements in early detection and treatment, BC remains a major concern, particularly in low- and middle-income countries (LMICs).</p>
        <p id="paragraph-3" />
      </sec>
      <sec id="heading-9382e69d2d42e65926c61c2adf1004b0">
        <title>
          <italic id="italic-3">Epidemiology and Mortality<italic id="italic-4"/></italic>
        </title>
        <p id="paragraph-5">In 2020, the International Agency for Research on Cancer (IARC) reported over 2.26 million new BC cases and approximately 685,000 deaths worldwide. Notably, LMICs accounted for a disproportionately high number of these deaths, with nearly 500,000 women succumbing to the disease in these regions. This represents almost three-quarters of global BC mortality [2].</p>
        <p id="paragraph-6">● Incidence: 2.26 million new cases (2020) [2]</p>
        <p id="paragraph-7">● Mortality: 685,000 deaths (2020) [2]</p>
        <p id="paragraph-8">● LMIC Mortality: 500,000 deaths (2020) [2]</p>
        <p id="paragraph-0dcee18327a4e7d1a134335f3810a178">● Male Incidence: Approximately 0.5-1% of all BC cases occur in men [2].</p>
        <p id="paragraph-92403c06d13dcf888ae74bf8aac6b4e6">The IARC projects a significant increase in BC incidence and mortality by 2040, with estimates exceeding 3 million new cases and 1 million deaths annually [3]. This anticipated surge is primarily attributed to demographic shifts, such as population aging, and lifestyle changes, particularly in LMICs [2].</p>
        <p id="paragraph-4" />
      </sec>
      <sec id="heading-60bf984260a5e9ecdb2e5d6ce00a1fc3">
        <title>
          <italic id="italic-7915b70db45221d600b27fae00d65a4c">Risk Factors<italic id="italic-eab390171366029b34d69c7969449cad"/></italic>
        </title>
        <p id="paragraph-cec4d45bad54b93e693de77b047aff42">The development of BC is influenced by a complex interplay of genetic, hormonal, and lifestyle factors.</p>
        <p id="paragraph-15b5954ed9d559b9169783a070726ee2">● Genetic Factors:</p>
        <p id="paragraph-492f9d9cdc8b57c29daa0a3773989137">o Hereditary factors account for 10-30% of BC cases, with 5-10% linked to strong hereditary predispositions [4].</p>
        <p id="paragraph-9">o Mutations in high-penetrance genes, such as BRCA1 and BRCA2, significantly increase BC risk. Approximately 5-10% of breast cancer cases are related to these gene mutations.</p>
        <p id="paragraph-523f1ef5466ef0e514eb18149504ffcc">o BRCA1 and BRCA2 mutations, which are inherited in 60% of cases, impair DNA repair, transcription, and cell cycle regulation, leading to increased cancer susceptibility [4].</p>
        <p id="paragraph-2e458ec77fc3a2ba73552bf5583b1509">● Hormonal Factors:</p>
        <p id="paragraph-db0e96b738bac2fe62e3c45d4a7c4672">o Prolonged exposure to estrogen, without adequate progesterone counterbalance, is associated with increased BC risk.</p>
        <p id="paragraph-aa6dc5fe2dc81880edbda6e3770df4cc">o Early menarche and late menopause contribute to increased lifetime estrogen exposure [5, 6].</p>
        <p id="paragraph-3ce2c2e2721656c0642061b70a6235f4">o Hormone receptor status (ER and PgR) is crucial for determining treatment strategies, with approximately 75-80% of invasive BCs being ER-positive [7].</p>
        <p id="paragraph-7b513037f00724239e6fe10d1d1cd7d7">● Lifestyle Factors:</p>
        <p id="paragraph-ee606711d53d8ea70fc43edd8f9a59e2">o Dietary habits, physical inactivity, and exogenous hormone use are modifiable risk factors.</p>
        <p id="paragraph-6465225d74ea9cf007389d821377f41d">o Obesity, particularly postmenopausal, is associated with increased BC risk [8].</p>
        <p id="paragraph-f15df4d861ea5da5f602562bb9ad0f04">o Alcohol consumption increases breast cancer risk.</p>
        <p id="paragraph-10">o Lack of breastfeeding is also considered a risk factor [9, 10].</p>
        <p id="paragraph-11">● Age:</p>
        <p id="paragraph-12">o The risk of breast cancer increases with age. The lifetime risk of developing breast cancer in the US is 1 in 8. [11].</p>
        <p id="paragraph-13">● Personal History:</p>
        <p id="paragraph-14">o A prior diagnosis of DCIS, or invasive breast cancer, increases the risk of developing future breast cancer [12].</p>
        <p id="paragraph-15">● Family History:</p>
        <p id="paragraph-16">o A family history of breast cancer, especially in a first degree relative, increases breast cancer risk [6].</p>
        <p id="paragraph-17" />
      </sec>
      <sec id="heading-7cb73f990cd1be98e9aac52a6ad893e3">
        <title>
          <italic id="italic-9a83d70d2de23eb545153e4ce5a6ce2b">Molecular Subtypes and Biomarkers<italic id="italic-2b570de1b43a109b2d5c5afc4cbff041"/></italic>
        </title>
        <p id="paragraph-19">BC is classified into distinct molecular subtypes based on the expression of estrogen receptor (ER), progesterone receptor (PgR), and human epidermal growth factor receptor 2 (HER2).</p>
        <p id="paragraph-20">● Luminal A: ER-positive and/or PgR-positive, HER2- negative, low Ki-67, favorable prognosis [7].</p>
        <p id="paragraph-21">● Luminal B: ER-positive and/or PgR-positive, HER2- positive or negative, high Ki-67, less favorable prognosis than Luminal A [7].</p>
        <p id="paragraph-22">● HER2-enriched: ER-negative and PgR-negative, HER2-positive, aggressive growth, responsive to HER2- targeted therapies [7].</p>
        <p id="paragraph-23">● Triple-negative (TNBC): ER-negative, PgR- negative, and HER2-negative, aggressive, limited treatment options [7].</p>
        <p id="paragraph-24">Biomarkers such as Ki-67 and HER2 play crucial roles in prognosis and treatment selection.</p>
        <p id="paragraph-25">● Ki-67: A marker of cell proliferation, with higher values indicating more aggressive tumor growth [7].</p>
        <p id="paragraph-26">● HER2: Overexpression is associated with aggressive tumor behavior and responsiveness to HER2-targeted therapies [13].</p>
        <p id="paragraph-27" />
      </sec>
      <sec id="heading-86397569830e86f776fb3502d94c7658">
        <title>
          <italic id="italic-9bb941be1100b280a029da9601dacee7">Regional Considerations: Northeast India<italic id="italic-d4f9268567b508ea8178d0330ea9a831"/></italic>
        </title>
        <p id="paragraph-29">The Northeast region of India, including Assam, has a distinctive sociocultural and dietary profile that influences its disease burden. High prevalence of tobacco and betel nut consumption, often starting at a young age, along with alcohol use and low intake of green vegetables, contributes to systemic inflammation and hormonal imbalances that may increase breast cancer susceptibility [14, 15]. Furthermore, limited access to healthcare facilities, lower rates of regular screening, and socioeconomic barriers often delay diagnosis. Cultural factors also play a role; for instance, housewives often ignore early symptoms due to family obligations. These factors potentially contribute to the observed dominance of hormone receptor-negative and triple-negative breast cancer (TNBC) subtypes in this region, which are known for poor prognosis and limited treatment options [16, 17].</p>
        <p id="paragraph-9d918c69f5352e3c76d00dba70968af6" />
      </sec>
      <sec id="heading-690b31f2253feb4f2764cc85bdfb1a4a">
        <title>
          <italic id="italic-6763069e63186d5284af40bf1e8d98e9">PIK3CA and Targeted Therapies<italic id="italic-6ec19272fa23fd300bdd7805514555b5"/></italic>
        </title>
        <p id="paragraph-8479c1d69ac408037796806561bf82ed">● PIK3CA mutations are common in BC, particularly in HR-positive subtypes [18].</p>
        <p id="paragraph-3f5303e498dba8bb5897a9a5a7a40d80">● Targeting the PI3K pathway offers promising therapeutic strategies, including monoclonal antibodies such as trastuzumab and pertuzumab [19, 20].</p>
        <p id="paragraph-098d060d32f5575bfbe0b8353177f4e2">● These monoclonal antibodies have shown to increase survival rates for HER2 positive breast cancer. [13].</p>
        <p id="paragraph-bfcffb90e6f51fbca1837888c955a806" />
      </sec>
    </sec>
    <sec id="heading-70928387387b7083aefed4c489485e2b">
      <title>Methodology</title>
      <sec id="heading-ab70fdc6f4f5f6831cf61101080f524d">
        <title>
          <italic id="italic-e363d169c6735a65134ca4b47d6d3ace">Patient Selection And Ethical Approval<italic id="italic-510b7a56ab15e4f3287cb3adc1e4bfb0"/></italic>
        </title>
        <p id="paragraph-b81dd03368577de7b1da9d24ff18891b">Fifty consecutive, non-duplicative female breast cancer patients diagnosed with HER2 overexpression or amplification, as per ASCO-CAP 2007 guidelines, were enrolled from the State Cancer Institute, Guwahati, between November 2021 and June 2022. Patients were informed verbally and in writing about the potential research use of their tissue samples. At the time of surgery or biopsy informed consent was being obtained from the patients. Patients had the right to decline or withdraw at any stage without affecting their treatment procedures. This study was approved by the Institutional Ethics Committees of Gauhati University and the State Cancer Institute, Guwahati.</p>
        <p id="paragraph-4b6701312e13cc8cf61ca965dcab6ea4" />
      </sec>
      <sec id="heading-32fe603692577c04778bd0881fc5da1f">
        <title>
          <italic id="italic-5">Inclusion Criteria<italic id="italic-6"/></italic>
        </title>
        <p id="paragraph-3ee5efe29e741394a9291c074a028b9e">● Female breast cancer patients</p>
        <p id="paragraph-e1090ea64955ca33ea67d754d6ac3f33">● HER2 overexpression or amplification confirmed by IHC scoring of 3+ or via FISH for confirmation</p>
        <p id="paragraph-4d4ec8654eb4f32e7454fe6a8ca663e0">● Availability of formalin-fixed paraffin-embedded (FFPE) tissue blocks.</p>
        <p id="paragraph-a58e69615551c34ea1f41302e7290eb5" />
      </sec>
      <sec id="heading-0a152da564f4f1a384f2c861b704c335">
        <title>
          <italic id="italic-7">Exclusion Criteria<italic id="italic-8"/></italic>
        </title>
        <p id="paragraph-545d2687947d5ce89fe7e5ad64ec4bdc">1. HER2-equivocal cases (IHC score 2+) were excluded from molecular and statistical analyses. However, they were initially recorded for completeness but were not included in mutation or statistical correlation results.</p>
        <p id="paragraph-18" />
      </sec>
      <sec id="heading-79bfee92c5dfdcd2ede04338d01f3146">
        <title>
          <italic id="italic-9">DNA Extraction And Quantification<italic id="italic-10"/></italic>
        </title>
        <p id="paragraph-3c40015700e57a83cde6a87bf30bb36c">Genomic DNA was extracted from 10 µm thick FFPE sections using the Qiagen DNeasy Blood &amp; Tissue Kit following the manufacturer’s instructions. The concentration and purity of extracted DNA were assessed using a Multi Scan GO Thermo Scientific spectrophotometer.</p>
        <p id="paragraph-a96f328e4d130b08c0fa494a435e6587" />
      </sec>
      <sec id="heading-6319df4223d412185ef2d70170406c1a">
        <title>
          <italic id="italic-4bc56243b77399495f8c94c81226f319">DNA Extraction<italic id="italic-5f1aee13461b8ca5a7b0468b77e79393"/></italic>
        </title>
        <p id="paragraph-0f9ca9463863fda09a713dd89f650a95">DNA was extracted from samples (bone marrow aspirates or peripheral blood) by using the manufacturer instruction</p>
        <p id="paragraph-3738c0ad67a474711bfb95b47fbe12ad">. The procedure of DNA extraction is given below</p>
        <p id="paragraph-5ce7586209a91d661e161b7d6cce2aa0" />
      </sec>
      <sec id="heading-a65388969471c72b0250763015975519">
        <title>
          <italic id="italic-e4e66d28c111caa509f63e530e02338d">Materials Required<italic id="italic-e202fae92f2d52b81468598fa60bb123"/></italic>
        </title>
        <p id="paragraph-d4bcfad6ab37433b8d38dd79e902b49e">Qiagen DNeasy blood and tissue kit (69504), Centrifuge (11000 rpm), 95-100%</p>
        <p id="paragraph-a6426196cf05a63f3913548b92c17a52">ethanol, 56°heat block, Pipette (20-200μL, 200-1000μL), Vortex Mixer.</p>
        <p id="paragraph-409553e9aa269ff2dc3e7a77101a39b0" />
      </sec>
      <sec id="heading-dffcb993f10ed7f15fff5df6972ef6cb">
        <title>
          <italic id="italic-8c4cbff5fbfe657fad5ac35db49e172d">Procedure<italic id="italic-2830b91f42bc4c970155d6a984042cf1"/></italic>
        </title>
        <p id="paragraph-4d66eddee972316a3568968c03d8dc40">∙ 3 sections (10 micron thick) of FFPE tissue were taken in 1.5 centrifuge tube and 1mL xylene added.</p>
        <p id="paragraph-dc5e905b30304e107709752e21b68025">∙ Mixed thoroughly by vortexing and centrifuged at 11000 rpm for 5 min.</p>
        <p id="paragraph-248c58c690f0d13950ef6b10f5d05b19">∙ Supernatant was discarded and 1mL ethanol added.</p>
        <p id="paragraph-c33980cfe3f4d3fc3e46497032369d4c">∙ Mixed thoroughly by vortexing, centrifuged at 11000 rpm for 1 minute and the supernatant was discarded.</p>
        <p id="paragraph-bc36f5cd6b7a8b8fd6d1e060c8ed41d2">∙ The tissue dried at 56°C.</p>
        <p id="paragraph-829c7bfeb4d95a7bb18cfb2d62030975">∙ 200μL buffer ATL + 20 μL Proteinase K added in labelled 1.5 mL lysis tube.</p>
        <p id="paragraph-74186c8d9308494a10e4b4bc10d55580">∙ Mixed thoroughly by vortexing.</p>
        <p id="paragraph-452cf397c06cbb0c938e8bf2e8bd81f5">∙ Incubated overnight at 56°C for completely lysis of the tissue.</p>
        <p id="paragraph-5528ce31d75967e32d8f40d93430df02">∙ Mixed thoroughly by vortexing.</p>
        <p id="paragraph-27562331a159e087050cee454ad9dad1">∙ 200ul AL buffer added to lysed sample and incubated for 15 min. at 56°C.</p>
        <p id="paragraph-4ea0c92653624a0790cff5ff9f98db5e">∙ 200μL ethanol added.</p>
        <p id="paragraph-4d5a84352ff2dfd4f43db105330fb0f6">∙ Mixed thoroughly by vortexing.</p>
        <p id="paragraph-aeee9c498813a23ff4313a094de0a685">∙ The mixture transferred into DNeasy mini spin column placed into 2mL collection tube.</p>
        <p id="paragraph-b67a2912eb2069882e3962e63eafdd73">∙ Centrifuged at 11000 rpm for 1 minute.</p>
        <p id="paragraph-28">∙ Discarded flow through and collection tube. The column is placed in a 2mL collection tube.</p>
        <p id="paragraph-183f74b3c544fa7e0b4a618a9a2e26ed">∙ 500μL buffer AW1 added and centrifuged at 11000 rpm for 1 minute.</p>
        <p id="paragraph-30">∙ Again, discarded flow through and placed the spin column in new 2mL collection tube.</p>
        <p id="paragraph-32">∙ 500μL buffer AW2 added and centrifuged at 11000 rpm for 1 minute.</p>
        <p id="paragraph-33">∙ Discarded flow through and centrifuged for dry spin and discarded the collection tube.</p>
        <p id="paragraph-35">∙ The spin column transferred to the new 1.5mL microcentrifuge tube.</p>
        <p id="paragraph-37">∙ The DNA eluted by adding 50μL (FFPE) buffer AE to the centre of the column membrane.</p>
        <p id="paragraph-39">∙ Incubated for 5 minutes at room temperature and centrifuge at 11000 rpm for 1 minute.</p>
        <p id="paragraph-40">∙ Stored the extracted DNA at -20°C/-80°C till downstream processing.</p>
        <p id="paragraph-6dd6efb1a92cf6c5a5e0031874277002" />
      </sec>
      <sec id="heading-2eba7b7faf2c4f3bd309eb6155f304b9">
        <title>
          <italic id="italic-48667a38f5945ff9c158d70f826a05bb">PIK3CA mutation analysis and Tumor Grading<italic id="italic-d233d4058b630800620f9c1d3432b14e"/></italic>
        </title>
        <p id="paragraph-236abc2b0a67a050f5af76bc2548d163">PIK3CA mutations were detected using the Therascreen® PIK3CA RGQ PCR Kit (Qiagen), which is a qualitative real-time PCR assay targeting known hotspot mutations, including Exon 20.</p>
        <p id="paragraph-a5e351e06e8cad8e94b72810b07604a6" />
      </sec>
      <sec id="heading-6afc527bb83d89177342a431df9dda2b">
        <title>
          <italic id="italic-1d11624f93f8a2b2aa13866a44374bb6">Tumor Grading Criteria<italic id="italic-e2137a05c0865b8690f4f5d87d8c6e5e"/></italic>
        </title>
        <p id="paragraph-84f6d937a585e09946e387893b802023">Tumor were graded histopathologically based on mitotic index, nuclear pleomorphism, and tubule formation, by following the Nottingham grading system:</p>
        <p id="paragraph-f91ab69e32fa672e1450aec4cabd0734">Grade II: Moderately differentiated tumors with intermediate prognosis.</p>
        <p id="paragraph-f639028b706ef3ea1a501fb403eb9c15">Grade III: Poorly differentiated tumors with aggressive clinical behavior.</p>
        <p id="paragraph-d21aebe4174f088ef86cc92f7424c2fa" />
      </sec>
      <sec id="heading-fd7c8e356311f4256ad05021d8079fd1">
        <title>
          <italic id="italic-88edc0d04252201b1c6dd71453edc2cc">Clinical Significance of Exon 20 Mutation<italic id="italic-c8635b80797e99a2b2f7446f2f37adbd"/></italic>
        </title>
        <p id="paragraph-7bc39e3818b46059c0742b08c318824b">● PIK3CA Exon 20 mutations are associated with enhanced PI3K pathway activation, promoting cell survival, proliferation, and resistance to anti-HER2 therapies. Their presence may indicate eligibility for targeted therapies such as PI3Kα-specific inhibitors (e.g., alpelisib) in hormone receptor-positive cases.</p>
        <p id="paragraph-1017c40cc5d9528bb4411c126b638f61" />
      </sec>
      <sec id="heading-6651403754ce1a18abad03d44d78508b">
        <title>
          <italic id="italic-836768cdaa48de774c4ad5dae4d77bc5">Detection Of Pik3ca Mutations By therascreen PIK3CA <italic id="italic-8df644743875687bb2fa9acb7b941b40"/></italic>
          <italic id="italic-5a1dab9d43cbe53050faceba288a4121">RGQ PCR KIT<italic id="italic-0ad2f649d52fe9e6bf7f45ce874b3690"/></italic>
        </title>
        <p id="paragraph-1fbfcd2dca140971c4dc6977996bc8f2">PIK3CA mutations were analysed on genomic DNA by PCR amplification.</p>
        <p id="paragraph-3885345bc1f6072baca0411f703105b5">As per manufacturer instructions of the kit were performed to detect different types of PIK3CA mutations.</p>
        <p id="paragraph-82163bc6ca07b20b0f8ab9be6e1c67fa" />
      </sec>
    </sec>
    <sec id="heading-f3821da2e8a24ebbd24ff1b17f8e1e96">
      <title>Results</title>
      <p id="paragraph-dae810b3f2d4d060e22349356c6c6261">Data of patient profiling and expression of Estrogen (ER)- Progesterone (PrG) Hormone, HER2/neu gene and Ki-67 biomarker (Table 1, 2 and 3), (Figure 1 and 2).</p>
      <table-wrap id="table-figure-7cf1fe76d162f078564de0bd24df8b65">
        <label>Table 1. Expression of Estrogen (ER) in Patient Report</label>
        <caption>
          <title></title>
          <p id="paragraph-728aa7c6cf3ace8cda33cf50cca58d64" />
        </caption>
        <table id="table-8000d6aceb334b2b82c1cf194aa7ba38">
          <tbody>
             <tr>
               <td>Patient Serial Number</td>
               <td>Types</td>
               <td>Age</td>
               <td>Status of ER</td>
            </tr>
            <tr>
               <td>1</td>
               <td>Invasive breast carcinoma</td>
               <td>66/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>2</td>
               <td>Invasive breast carcinoma</td>
               <td>37/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>3</td>
               <td>Residual invasive breast carcinoma</td>
               <td>48/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>4</td>
               <td>Left breast swelling</td>
               <td>27/F</td>
               <td>Result Awaited</td>
            </tr>
            <tr>
               <td>5</td>
               <td>Invasive breast carcinoma</td>
               <td>75/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>6</td>
               <td>Invasive breast carcinoma</td>
               <td>41/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>7</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>8</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>9</td>
               <td>Invasive breast carcinoma</td>
               <td>59/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>10</td>
               <td>Extensive Ductal Carcinoma</td>
               <td>42/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>11</td>
               <td>Metastatic CA breast</td>
               <td>43/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>12</td>
               <td>Invasive ductal carcinoma</td>
               <td>74/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>13</td>
               <td>Metastatic invasive breast carcinoma</td>
               <td>60/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>14</td>
               <td>Invasive breast carcinoma</td>
               <td>56/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>15</td>
               <td>Invasive breast carcinoma</td>
               <td>47/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>16</td>
               <td>Invasive breast carcinoma</td>
               <td>55/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>17</td>
               <td>Metastatic breast carcinoma</td>
               <td>50/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>18</td>
               <td>Invasive breast carcinoma</td>
               <td>52/F</td>
               <td>Negative</td>
            </tr>
          </tbody>
        </table>
      </table-wrap>
      <p id="paragraph-ae7d2853b6327f4d83c776f0bc1d54ef" />
      <table-wrap id="table-figure-4410647be2318e05c801b8aad3b8176d">
        <label>Table 2. Expression of Progesterone (PrG) Hormone in the Patient Report</label>
        <caption>
          <title></title>
          <p id="paragraph-ad7965aa91a3b5a51395fabd0b903384" />
        </caption>
        <table id="table-ac0596978e247c111310078d441df7f9">
          <tbody>
            <tr>
               <td>Patient Serial Number</td>
               <td>Types</td>
               <td>Age</td>
               <td>Status of PrG</td>
            </tr>
            <tr>
               <td>1</td>
               <td>Invasive breast carcinoma</td>
               <td>66/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>2</td>
               <td>Invasive breast carcinoma</td>
               <td>37/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>3</td>
               <td>Residual invasive breast carcinoma</td>
               <td>48/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>4</td>
               <td>Left breast swelling</td>
               <td>27/F</td>
               <td>Result Awaited</td>
            </tr>
            <tr>
               <td>5</td>
               <td>Invasive breast carcinoma</td>
               <td>75/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>6</td>
               <td>Invasive breast carcinoma</td>
               <td>41/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>7</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>8</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>9</td>
               <td>Invasive breast carcinoma</td>
               <td>59/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>10</td>
               <td>Extensive Ductal Carcinoma</td>
               <td>42/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>11</td>
               <td>Metastasis CA breast</td>
               <td>43/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>12</td>
               <td>Invasive ductal carcinoma</td>
               <td>74/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>13</td>
               <td>Metastatic invasive breast carcinoma</td>
               <td>60/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>14</td>
               <td>Invasive breast carcinoma</td>
               <td>56/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>15</td>
               <td>Invasive breast carcinoma</td>
               <td>47/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>16</td>
               <td>Invasive breast carcinoma</td>
               <td>55/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>17</td>
               <td>Metastatic breast carcinoma</td>
               <td>50/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>18</td>
               <td>Invasive breast carcinoma</td>
               <td>52/F</td>
               <td>Negative</td>
            </tr>
          </tbody>
        </table>
      </table-wrap>
    </sec>
    <sec id="heading-4a34293a8ebf8cd3c4640ff5d40fd450">
      <title />
      <table-wrap id="table-figure-a6271c862ef1fcdce26be6d5256c61b7">
        <label>Table 3. Expression of HER2/neu Gene in the Patient Report</label>
        <caption>
          <title></title>
          <p id="paragraph-194336ad7c31aca58e42b961d581e676" />
        </caption>
        <table id="table-b7a1c15552651b24e531b7c0c001b687">
          <tbody>
            <tr>
               <td>Patient Serial Number</td>
               <td>Types</td>
               <td>Age</td>
               <td>Status of HER2/neu</td>
            </tr>
            <tr>
               <td>1</td>
               <td>Invasive breast carcinoma</td>
               <td>66/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>2</td>
               <td>Invasive breast carcinoma</td>
               <td>37/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>3</td>
               <td>Residual invasive breast carcinoma</td>
               <td>48/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>4</td>
               <td>Left breast swelling</td>
               <td>27/F</td>
               <td>Result Awaited</td>
            </tr>
            <tr>
               <td>5</td>
               <td>Invasive breast carcinoma</td>
               <td>75/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>6</td>
               <td>Invasive breast carcinoma</td>
               <td>41/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>7</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>Equivocal (2+)</td>
            </tr>
            <tr>
               <td>8</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>9</td>
               <td>Invasive breast carcinoma</td>
               <td>59/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>10</td>
               <td>Extensive Ductal Carcinoma</td>
               <td>42/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>11</td>
               <td>Metastasis CA breast</td>
               <td>43/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>12</td>
               <td>Invasive ductal carcinoma</td>
               <td>74/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>13</td>
               <td>Metastatic invasive breast carcinoma</td>
               <td>60/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>14</td>
               <td>Invasive breast carcinoma</td>
               <td>56/F</td>
               <td>Positive</td>
            </tr>
            <tr>
               <td>15</td>
               <td>Invasive breast carcinoma</td>
               <td>47/F</td>
               <td>Negative</td>
            </tr>
            <tr>
               <td>16</td>
               <td>Invasive breast carcinoma</td>
               <td>55/F</td>
               <td>Equivocal (SCORE 2+)</td>
            </tr>
            <tr>
               <td>17</td>
               <td>Metastatic breast carcinoma</td>
               <td>50/F</td>
               <td>Equivocal (SCORE 2+)</td>
            </tr>
            <tr>
               <td>18</td>
               <td>Invasive breast carcinoma</td>
               <td>52/F</td>
               <td>Negative</td>
            </tr>
          </tbody>
        </table>
      </table-wrap>
    </sec>
    <sec id="heading-88962699b09a1b025e784315d20eb874">
      <title />
      <fig id="figure-panel-b63e078e882a05c304747e4bd6d476c5">
        <label>Figure 1. Distribution of ER and PgR expression among breast cancer cases (n = 50). (Note: Data variability may arise due to results pending or missing hormone status in some patients; final percentages are based on interpretable cases.). Expression of ER and PgR (Figure 1). Out of 50 breast cancer patients: ER (Estrogen Receptor) positivity was observed in 50% of cases. PgR (Progesterone Receptor) positivity was seen in 33% of cases</label>
        <caption>
          <title></title>
          <p id="paragraph-4425a440bd634ebc2f829ca8591c5aeb" />
        </caption>
        <graphic id="graphic-5b3371f56b64ede9e8303ece186b7728" mimetype="image" mime-subtype="jpeg" xlink:href="http://waocp.com/journal/fig/cb/APJCB_V11_i1_N20_2026_Fig_1.jpg" />
      </fig>
      <fig id="figure-panel-60d2985decfec52ce8c05929f25a90b9">
        <label>Figure 2. In This Graph, HER2/neu Cases in Breast Cancer were 11.10% Positive, 67% Negative and 17% were Equivocal</label>
        <caption>
          <title></title>
          <p id="paragraph-a89319ec165227eba660a91ea10dad4d" />
        </caption>
        <graphic id="graphic-98d3e0e04c4aac64c0f58b0d03b7711f" mimetype="image" mime-subtype="jpeg" xlink:href="http://waocp.com/journal/fig/cb/APJCB_V11_i1_N20_2026_Fig_2.jpg" />
      </fig>
      <sec id="heading-e8df9296f00b14d0ca27101849b432a0">
        <title>
          <italic id="italic-11">Among the total patients<italic id="italic-12"/></italic>
        </title>
        <p id="paragraph-e322a48f375a9e62b4f70c5dda4fbbe1">● HER2-positive (3+)cases:11.1%(n=5/45)</p>
        <p id="paragraph-bab302354ec0f46a47cf89a31063520c">● HER2-negative:67% </p>
        <p id="paragraph-82764bc229fdd4279a3facef00ba2077">HER2-equivocal (2+):17%</p>
        <p id="paragraph-678f1ec1562e9f5aa536ad60df8b3a09">Equivocal cases (Patients 7, 16, 17) were excluded</p>
        <p id="paragraph-a3036a0292ed8c5d9a118a61bfc6e54d">from downstream mutation analysis.</p>
        <p id="paragraph-96c4dbf1636ae62ec752f76cd3afaef5">HER2/neu status distribution among breast cancer cases.</p>
        <p id="paragraph-faa662f374d80efaf103768dbe234630">Triple-Negative Breast Cancer (TNBC)</p>
        <p id="paragraph-b292b08a58b216b8f09adaef1277a9a7">Of the interpretable cases (excluding equivocal HER2), 30% were triple-negative (ER-/PgR-/HER2-). This aligns with literature reports from similar regions. The discrepancy is reconciled by excluding HER2-equivocal cases from the TNBC analysis denominator (Table 4-7), (Figure 3, 4).</p>
        <table-wrap id="table-figure-53d22f201ea97897f5e409d328bed1b6">
          <label>Table 4. Expression of Ki-67 Biomarker in the Patient Report</label>
          <caption>
            <title></title>
            <p id="paragraph-61ce5b9ea38c72a3b31295d54e36248c" />
          </caption>
          <table id="table-49d2907d90f6852189d04c2fc1261064">
            <tbody>
               <tr>
               <td>Patient Serial Number</td>
               <td>Types</td>
               <td>Age</td>
               <td>Status of Ki-67 (%)</td>
            </tr>
            <tr>
               <td>1</td>
               <td>Invasive breast carcinoma</td>
               <td>66/F</td>
               <td>30</td>
            </tr>
            <tr>
               <td>2</td>
               <td>Invasive breast carcinoma</td>
               <td>37/F</td>
               <td>60</td>
            </tr>
            <tr>
               <td>3</td>
               <td>Residual invasive breast carcinoma</td>
               <td>48/F</td>
               <td>15</td>
            </tr>
            <tr>
               <td>4</td>
               <td>Left breast swelling</td>
               <td>27/F</td>
               <td>Result Awaited</td>
            </tr>
            <tr>
               <td>5</td>
               <td>Invasive breast carcinoma</td>
               <td>75/F</td>
               <td>90</td>
            </tr>
            <tr>
               <td>6</td>
               <td>Invasive breast carcinoma</td>
               <td>41/F</td>
               <td>25</td>
            </tr>
            <tr>
               <td>7</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>30</td>
            </tr>
            <tr>
               <td>8</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>80</td>
            </tr>
            <tr>
               <td>9</td>
               <td>Invasive breast carcinoma</td>
               <td>59/F</td>
               <td>60</td>
            </tr>
            <tr>
               <td>10</td>
               <td>Extensive Ductal Carcinoma</td>
               <td>42/F</td>
               <td>67</td>
            </tr>
            <tr>
               <td>11</td>
               <td>Metastasis CA breast</td>
               <td>43/F</td>
               <td>20-25</td>
            </tr>
            <tr>
               <td>12</td>
               <td>Invasive ductal carcinoma</td>
               <td>74/F</td>
               <td>0</td>
            </tr>
            <tr>
               <td>13</td>
               <td>Metastatic invasive breast carcinoma</td>
               <td>60/F</td>
               <td>60</td>
            </tr>
            <tr>
               <td>14</td>
               <td>Invasive breast carcinoma</td>
               <td>56/F</td>
               <td>20-22</td>
            </tr>
            <tr>
               <td>15</td>
               <td>Invasive breast carcinoma</td>
               <td>47/F</td>
               <td>40</td>
            </tr>
            <tr>
               <td>16</td>
               <td>Invasive breast carcinoma</td>
               <td>55</td>
               <td>25</td>
            </tr>
            <tr>
               <td>17</td>
               <td>Metastatic breast carcinoma</td>
               <td>50</td>
               <td>30</td>
            </tr>
            <tr>
               <td>18</td>
               <td>Invasive breast carcinoma</td>
               <td>52</td>
               <td>70</td>
            </tr>
            </tbody>
          </table>
        </table-wrap>
        <p id="paragraph-a18846ab72a4569114ef1c9b2182a25f" />
        <table-wrap id="table-figure-b8714eab5daeea0cc67e59705d8d4176">
          <label>Table 5. For Case of the Expression of Triple Negative Gene in the Carcinoma of Left Breast or Formation Left Breast Lump in the Patient</label>
          <caption>
            <title></title>
            <p id="paragraph-fad476559725a8a7ababbc4cbac2c904" />
          </caption>
          <table id="table-fe62c467d837adc3330acf5fb88bcfd2">
            <tbody>
              <tr>
               <td>Patient Serial Number</td>
               <td>Types</td>
               <td>Age</td>
               <td>Status of % Triple negative cases= 30%</td>
            </tr>
            <tr>
               <td>1</td>
               <td>Invasive breast carcinoma</td>
               <td>66/F</td>
               <td>Mastectomy</td>
            </tr>
            <tr>
               <td>2</td>
               <td>Invasive breast carcinoma</td>
               <td>37/F</td>
               <td>Surgery</td>
            </tr>
            <tr>
               <td>3</td>
               <td>Residual invasive breast carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>4</td>
               <td>Left breast swelling</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>5</td>
               <td>Invasive breast carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>6</td>
               <td>Invasive breast carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>7</td>
               <td>Invasive breast carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>8</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>Surgery</td>
            </tr>
            <tr>
               <td>9</td>
               <td>Invasive breast carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>10</td>
               <td>Extensive Ductal Carcinoma</td>
               <td>42/F</td>
               <td>Surgery (Carcinoma in Right Breast)</td>
            </tr>
            <tr>
               <td>11</td>
               <td>Metastasis CA breast</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>12</td>
               <td>Invasive ductal carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>13</td>
               <td>Metastatic invasive breast carcinoma</td>
               <td>60/F</td>
               <td>Surgery</td>
            </tr>
            <tr>
               <td>14</td>
               <td>Invasive ductal carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>15</td>
               <td>Invasive ductal carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>16</td>
               <td>Invasive ductal carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>17</td>
               <td>Metastasis CA breast</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>18</td>
               <td>Invasive breast carcinoma</td>
               <td>52/F</td>
               <td>Surgery</td>
            </tr>
            </tbody>
          </table>
        </table-wrap>
        <p id="paragraph-c29162f0e590d196dbc0d335811e828f" />
        <table-wrap id="table-figure-9e045e1e0aeb27193d661867a00adb54">
          <label>Table 6. For the Case of Expression of the Percentage of Estrogen (ER) of the Left or Right Breast of Invasive Carcinoma in the Patient Report</label>
          <caption>
            <title></title>
            <p id="paragraph-42b23ec3f9296be7621a86ce7ffdcdef" />
          </caption>
          <table id="table-0213c72d6419d0e3259f26c0f37d6579">
            <tbody>
               <tr>
               <td>Patient Serial Number</td>
               <td>Types</td>
               <td>Age</td>
               <td>Status of % ER cases= 50%</td>
            </tr>
            <tr>
               <td>1</td>
               <td>Invasive breast carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>2</td>
               <td>Invasive breast carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>3</td>
               <td>Residual invasive breast carcinoma</td>
               <td>48/F</td>
               <td>Hormonal treatment (post-menopausal)</td>
            </tr>
            <tr>
               <td>4</td>
               <td>Left breast swelling</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>5</td>
               <td>Invasive breast carcinoma</td>
               <td>75/F</td>
               <td>Hormonal treatment</td>
            </tr>
            <tr>
               <td>6</td>
               <td>Invasive breast carcinoma</td>
               <td>41/F</td>
               <td>Hormonal Treatment</td>
            </tr>
            <tr>
               <td>7</td>
               <td>Invasive breast carcinoma</td>
               <td>33/F</td>
               <td>Hormonal Treatment</td>
            </tr>
            <tr>
               <td>8</td>
               <td>Invasive breast carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>9</td>
               <td>Invasive breast carcinoma</td>
               <td>59/F</td>
               <td>Hormonal Treatment</td>
            </tr>
            <tr>
               <td>10</td>
               <td>Extensive Ductal Carcinoma</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>11</td>
               <td>Metastasis CA breast</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>12</td>
               <td>Invasive ductal carcinoma</td>
               <td>74/F</td>
               <td>Hormonal treatment (post-menopausal)</td>
            </tr>
            <tr>
               <td>13</td>
               <td>Metastasis CA breast</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>14</td>
               <td>Invasive ductal carcinoma</td>
               <td>56/F</td>
               <td>Hormonal treatment (post-menopausal)</td>
            </tr>
            <tr>
               <td>15</td>
               <td>Invasive ductal carcinoma</td>
               <td>47/F</td>
               <td>Hormonal treatment (post-menopausal)</td>
            </tr>
            <tr>
               <td>16</td>
               <td>Invasive ductal carcinoma</td>
               <td>55/F</td>
               <td>Hormonal treatment (post-menopausal)</td>
            </tr>
            <tr>
               <td>17</td>
               <td>Metastasis CA breast</td>
               <td/>
               <td/>
            </tr>
            <tr>
               <td>18</td>
               <td>Invasive ductal carcinoma</td>
               <td/>
               <td/>
            </tr>
            </tbody>
          </table>
        </table-wrap>
        <table-wrap id="table-figure-1c661123a08bd93f8e812cce7ee45b62">
          <label>Table 7. For the Analysis of PIK3CA Mutation in the Patient Samples</label>
          <caption>
            <title></title>
            <p id="paragraph-08ef1fb13bf4c544d9c9b51d952ca5de" />
          </caption>
          <table id="table-a35025edef028b0fec4f671ab362cc0d">
            <tbody>
              <tr>
               <td>SL. NO.</td>
               <td>ER</td>
               <td>PgR</td>
               <td>PIK3CA Mutation</td>
               <td>Grade</td>
            </tr>
            <tr>
               <td>1</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>2</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>3</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>4</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>II</td>
            </tr>
            <tr>
               <td>5</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>6</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>II</td>
            </tr>
            <tr>
               <td>7</td>
               <td>Positive</td>
               <td>Negative</td>
               <td/>
               <td>II</td>
            </tr>
            <tr>
               <td>8</td>
               <td>Positive</td>
               <td>Negative</td>
               <td/>
               <td>II</td>
            </tr>
            <tr>
               <td>9</td>
               <td>Positive</td>
               <td>Positive</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>10</td>
               <td>Positive</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>11</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>12</td>
               <td>Positive</td>
               <td>Positive</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>13</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>14</td>
               <td>Positive</td>
               <td>Negative</td>
               <td>EXON 20</td>
               <td/>
            </tr>
            <tr>
               <td>15</td>
               <td>Positive</td>
               <td>Positive</td>
               <td/>
               <td>II</td>
            </tr>
            <tr>
               <td>16</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>17</td>
               <td>Negative</td>
               <td>Negative</td>
               <td>EXON 20</td>
               <td/>
            </tr>
            <tr>
               <td>18</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>19</td>
               <td>Positive</td>
               <td>Negative</td>
               <td/>
               <td>III</td>
            </tr>
            <tr>
               <td>20</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>II</td>
            </tr>
            <tr>
               <td>21</td>
               <td>Negative</td>
               <td>Negative</td>
               <td>EXON 20</td>
               <td>III</td>
            </tr>
            <tr>
               <td>22</td>
               <td>Positive</td>
               <td>Positive</td>
               <td/>
               <td>II</td>
            </tr>
            <tr>
               <td>23</td>
               <td>Negative</td>
               <td>Negative</td>
               <td/>
               <td>II</td>
            </tr>
            <tr>
               <td>24</td>
               <td>Negative</td>
               <td>Negative</td>
               <td>EXON 20</td>
               <td>III</td>
            </tr>
            <tr>
               <td>25</td>
               <td>Positive</td>
               <td>Negative</td>
               <td>EXON 20</td>
               <td>III</td>
            </tr>
            </tbody>
          </table>
        </table-wrap>
        <p id="paragraph-a8faae94927d806ad4f589f92d1dbd24" />
        <fig id="figure-panel-3ce5cd2c41036e613a20ed8dbb177bd4">
          <label>Figure 3. In this Graph, Out of all Patients only 28% Opted for Surgery and 15% Opted for Hormonal Treatment in the Breast Cancer Cases</label>
          <caption>
            <title></title>
            <p id="paragraph-4230267113418bfe7a58c985cb468160" />
          </caption>
          <graphic id="graphic-6cce19620fec27bd4071cbfb365fd097" mimetype="image" mime-subtype="jpeg" xlink:href="http://waocp.com/journal/fig/cb/APJCB_V11_i1_N20_2026_Fig_3.jpg" />
        </fig>
        <fig id="figure-panel-3564de76c1ec9f2303a4ee0196054b58">
          <label>Figure 4. This Graph Shows the Distribution of Tumor Grades and Frequency of Exon 20 mutations (n = 25), with 60% of breast cancer cases are of grade III type and 33% of breast cancer cases are grade II type. Exon 20 mutations were found in 5 cases (20%). All 5 cases with Exon 20 mutations were Grade III, suggesting a strong association with high-grade, aggressive tumors</label>
          <caption>
            <title></title>
            <p id="paragraph-a1bef0a14f7972d612daaf4b270d0c6d" />
          </caption>
          <graphic id="graphic-5310ff3ea01bc3eb1b8c10d5aff5d84f" mimetype="image" mime-subtype="jpeg" xlink:href="http://waocp.com/journal/fig/cb/APJCB_V11_i1_N20_2026_Fig_4.jpg" />
        </fig>
        <p id="paragraph-4df88c9d45c98b7719bc892ac62530db">In conclusion, in breast cancer, being the second most affected disease in the population of women worldwide. Larger sample studies are required to identify, analyse and measure the expression prevalence of ER-PR Hormone. It also interferes with result and analyses of the matter in different view by knowing the stages of different types of cancer with the help of Ki-67 biomarker to know the seriousness of the disease. HER2/neu expression and prevalence may differ with larger sample analyses which can interfere with the results of this study. The HER2/neu positivity was found to be 11.1%, much lower than the numbers reported from Delhi, Mumbai and southern India which have a positive rate between 20% and 25%. There are many reasons why neural connections vary regionally. A challenge in Northeast India is that patients arrive for diagnosis at later stages, often after the time for the most accurate HER2 testing has passed. Furthermore, problems related to HER2 testing equipment such as inconsistent IHC use and too few cases tested with FISH, can influence correct diagnosis. It is possible that choices in sample collection or the amount of genetic and cultural diversity in the Assamese affected the results. Various drugs like for HER2/neu-Herceptin is being used with positive expression of HER2/neu gene. Other than drugs surgery, chemotherapy and hormonal therapy are available for the treatment depending on the different types and level of invasion in the parts of body. Tobacco and betel nut usage, a high salt diet and eating little fruit or vegetables may alter Assam’s women’s hormone receptors and cancer rates. Also, since many women at the time were mostly housewives dealing with lots of household work, they experienced physical strain and found it hard to go for regular screening. When patients don’t know the first signs and come in later, it leads to a later diagnosis. So, with this preliminary study, a lot of knowledge about prevalence, prognosis and treatment planning is being gathered. Furthermore, after got approval by the ethical committee, extension of the work for prognosis outcome and mutational screening gave a better view of the survival rate and observed the chance of relapse of the breast cancer. It gave an insight that in Guwahati the prevalence rate is increasing in a low scale, reason may be due to lack of awareness, food habits, excessive household courses and have witness housewives being affected the most in the patient history. In Guwahati cases of HER2/ neu negative cases are highly prevalent in the population, so maximum surgical or chemotherapy treatment is observed, and all are Grade III stage i.e., having later stage of breast cancer having PIK3CA mutation in the Exon number 20 as followed the manufacturer protocol to preformed diagnostic techniques. In the five patients with Exon 20 mutations, these mutations strongly linked to Grade III tumors. When activated, these mutations turn on the PI3K/AKT/mTOR pathway which helps cancer cells multiply and become resistant to treatments designed for HER2. Recently, alpelisib, an inhibitor of PI3Kα, has demonstrated success in treating HR-positive, HER2-negative or HER2-equivocal disease. Conclusively, this work examines the spread of breast cancer subtypes and PIK3CA mutations among people affected in Assam, providing early evidence of the region’s special oncology profile. The low HER-2/neu levels, the significant percentage of TNBC and what’s more, PIK3CA Exon 20 mutations, suggest that breast tumors in Assam have a different molecular profile to those seen in Delhi and Mumbai.</p>
        <p id="paragraph-59482d8b1e3d44849fff71e465049aff">However, there are some things we must keep in mind when looking at the findings. The analysis is not as powerful and the findings cannot be applied more broadly due to the small number of subjects (n = 50). Excluding HER2-equivocal cases may have made it possible for molecular subtypes between basal and HER2 groups to be overlooked. Because data was taken from just one institution in retrospect, we cannot extrapolate the results across the Northeast Indian population.</p>
        <p id="paragraph-cd403ba7c4999f90951ab8dbcd889d67">Research studies should be carried out at multiple centers with a diversity of patients to make future work more reliable and useful. Introducing NGS to genomic analysis could enhance our understanding of PIK3CA mutations and other clinically important genomic changes. Focusing on public health, by running educational campaigns, implementing screening on a timely basis and increasing access to modern testing, will greatly contribute to better breast cancer care in places like Assam.</p>
        <p id="paragraph-e534b810553fc3c0d846e7410714b6bb" />
        <p id="paragraph-5b8350c695df314ae32eb86b5212edc3">
          <italic id="italic-3fa4f5f93226f1fcaedb0c12cb85930a">Declaration<italic id="italic-d0f9f1ac3cba0089e05160df89875226"/></italic>
        </p>
        <p id="paragraph-215b0991b7cca6a793dbeab3e89d8785">
          <italic id="italic-e6620af1a17fe63c386a95c486b12ae6">Author’s</italic>
          <italic id="italic-2b82f45c02e28f758f77110fd9634184" />
          <italic id="italic-f100fb9d467d30c7b9ecd53e452e5c12">contribution<italic id="italic-1cf7784415659dc9f21905f325541f7b"/></italic>
        </p>
        <p id="paragraph-b3f1307f3f44550a8ae782e0af277180">Researched, wrote, edited the manuscript: Tandralee Bhuyan, Ria Goswami. Researched, edited and reviewed the manuscript: Tandralee Bhuyan, Dr. Kandarpa Kr. Saikia.Interpretation, analysis and collection in the manuscript: Dr. Dushyant Kumar, Dr. Muktanjalee Deka.</p>
        <p id="paragraph-668f61670f7eef338d71be36c6e53772" />
        <p id="paragraph-a7c6649afd2020fe16742937dffbea0d">
          <italic id="italic-cd901de05791256e220c063219a10c0a">Availability of data and materials<italic id="italic-cdfe5af07a63fdfb96667553e975f07c"/></italic>
        </p>
        <p id="paragraph-af43b30a5d371fc20f40f49e1850b300">Gauhati university, H-prime lab Pvt. Ltd. and State Cancer Institute/Hospital.</p>
        <p id="paragraph-e63e89fa96e0ae44fc8992d9a4f15bb0" />
        <p id="paragraph-59bed441cefb7465976b99614e85b311">
          <italic id="italic-5c14513cc8254fcff81fafada7d44ed9">Financial support and sponsorship<italic id="italic-76c1881550c234bd389a461450e2cc30"/></italic>
        </p>
        <p id="paragraph-385a1eb27cf98fdcc77b53413831347c">None.</p>
        <p id="paragraph-f6d7ee7054ac219d4796d86a5af62059" />
        <p id="paragraph-b4bad6569c454ee65bde3a1dcf2208eb">
          <italic id="italic-a637dddba09f86b09eae2987bd61bc0c">Ethical approval and consent to participate<italic id="italic-ce654e8fdea3503fcd0d7f9fe2e424dc"/></italic>
        </p>
        <p id="paragraph-6fef02685b9ca3127b5419b9af441a70">H-prime lab Pvt. Ltd., State Cancer Institute/Hospital, Gauhati University.</p>
        <p id="paragraph-41664fe1464a3c78934b6a5950d6fe14" />
        <p id="paragraph-6360750a6f33a1b071d1fc5ee871c60b">
          <italic id="italic-13">Conflict of Interest<italic id="italic-14"/></italic>
        </p>
        <p id="paragraph-fac8895481063d4e3d894cd8b3db3208">Not applicable.</p>
        <p id="paragraph-afb0f94f1b8b3c465802da64a6753f69" />
        <p id="paragraph-85e7349b3a24842b6e9bab0123de27c1">
          <italic id="italic-fda6c8aa4fc5058a7a142c18f49bd17a">Consent for Publication<italic id="italic-1d6bd2229954c7dd694a4856b2958a6a"/></italic>
        </p>
        <p id="paragraph-3934bd781cc43999fe579352ac4c1e41">Not applicable.</p>
        <p id="paragraph-db62359035b475a362dfac5dd73cb151" />
      </sec>
    </sec>
    <sec id="heading-7b88f2c0a45ade034806dda9a58f5e02">
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